Structure-guided design, synthesis, and evaluation of guanine-derived inhibitors of the eIF4E mRNA-cap interaction

J Med Chem. 2012 Apr 26;55(8):3837-51. doi: 10.1021/jm300037x. Epub 2012 Apr 18.

Abstract

The eukaryotic initiation factor 4E (eIF4E) plays a central role in the initiation of gene translation and subsequent protein synthesis by binding the 5' terminal mRNA cap structure. We designed and synthesized a series of novel compounds that display potent binding affinity against eIF4E despite their lack of a ribose moiety, phosphate, and positive charge as present in m7-GMP. The biochemical activity of compound 33 is 95 nM for eIF4E in an SPA binding assay. More importantly, the compound has an IC(50) of 2.5 μM for inhibiting cap-dependent mRNA translation in a rabbit reticular cell extract assay (RRL-IVT). This series of potent, truncated analogues could serve as a promising new starting point toward the design of neutral eIF4E inhibitors with physicochemical properties suitable for cellular activity assessment.

Publication types

  • Research Support, U.S. Gov't, Non-P.H.S.

MeSH terms

  • Animals
  • Crystallography, X-Ray
  • Drug Design
  • Eukaryotic Initiation Factor-4E / chemistry
  • Eukaryotic Initiation Factor-4E / metabolism*
  • Guanine / analogs & derivatives*
  • Guanine / chemical synthesis
  • Guanine / pharmacology
  • Guanosine Monophosphate / analogs & derivatives*
  • Guanosine Monophosphate / chemical synthesis
  • Guanosine Monophosphate / pharmacology*
  • Humans
  • Inhibitory Concentration 50
  • Models, Molecular
  • Organophosphonates / chemical synthesis*
  • Organophosphonates / pharmacology
  • Phosphorous Acids
  • Protein Biosynthesis / drug effects
  • RNA Caps / chemistry
  • RNA Caps / metabolism*
  • Rabbits
  • Reticulocytes / drug effects
  • Reticulocytes / metabolism
  • Structure-Activity Relationship

Substances

  • 4-(7-(2-(4-chlorophenoxy)ethyl)-6-hydroxy-2-(methylamino)-7H-purin-8-yl)phenylphosphonic acid
  • Eukaryotic Initiation Factor-4E
  • Organophosphonates
  • Phosphorous Acids
  • RNA Caps
  • Guanine
  • Guanosine Monophosphate

Associated data

  • PDB/4DT6
  • PDB/4DUM